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https://www.abbs.info e-mail:[email protected] ISSN |
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Short Communication |
Sequence and
Expression of a cDNA Encoding Both Pituitary Adenylate Cyclase Activating
Polypeptide and Growth Hormone releasing Hormone in Grouper (Epinephelus
coioides)
JIANG Yong, LI Wen-Sheng,
XIE Jun, LIN Hao-Ran*
(
Institute
of Aquatic Economical Animal & Guangdong Provincial Key Laboratory for
Aquatic Economical Animal, Zhongshan University, Guangzhou 510275, China )
Abstract Both
pituitary adenylate cyclase activating polypeptide(PACAP) and growth hormone-releasing
hormone (GHRH) belong to the vasoactive intestinal polypeptide-glucagon-secretin
family. They are encoded on the same gene in vertebrates (birds, amphibian,
fish). Although the gene encoding PACAP and GHRH has been cloned in other fish
species, characterization of this gene in the commercially important grouper (Epinephelus
coioides) has not been previously reported. In this study, the GHRH/PACAP
cDNA was cloned from grouper hypothalamic tissue. Two cDNA variants of the
GHRH/PACAP precursor gene were identified as a result of alternative splicing,
a long form encoding both PACAP and GHRH and a short form encoding only PACAP.
Both the long and the short forms of the GHRH/PACAP precursor cDNA were
identified in grouper 22 tissues as well as expression in embryos and larvae by
semi-quantitative RT-PCR detection. PACAP / GHRH precursor mRNA was expressed
at a high level in the central nervous system than in several peripheral
tissues. The data presented here provide the report of PACAP/GHRH mRNA
expression in eye and gill tissues in fish. PACAP/GHRH mRNA was expressed in
grouper embryo and all larval stages examined and was expressed at a high level
starting on neurula stage onwards. The result suggests that PACAP/GHRH had an
important role in the development of embryos and larvae, especially in neurula
appearance stage.
Key words grouper
(Epinephelus coioides); pituitary adenylate cyclase-activating
polypeptide (PACAP); growth hormone-releasing hormone (GHRH); tissue
distribution; semi-quantitative RT-PCR
Pituitary adenylate
cyclase-activating polypeptide (PACAP) was first isolated from ovine
hypothalamic extracts based on its ability to stimulate adenylate cyclase in
rat pituitary cell cultures[1]. Two molecular form of PACAP have
been identified: a 38 amino acids form (PACAP-38) and a form comprised of the
27 N-terminal amino acids of PACAP-38 (PACAP-27)[2]. Evidence
indicates that both forms of PACAP are derived from the same gene and mRNA
precursor[3]. Growth hormone releasing hormone (GHRH) was first
isolated from a human pancreatic tumour that caused acromegaly based on its
ability to stimulate growth hormone release[4, 5]. GHRH is primarily
produced in the hypothalamus and acts on the pituitary to cause the release of
growth hormone from somatotrophs[6]. In addition, GHRH is produced
in peripheral tissues such as the testis and ovary, and in the brain during
development[7-9]. An increase in cAMP is the main
mechanism by which GHRH acts. Both GHRH and PACAP belong to the vasoactive
intestinal polypeptide-glucagon-secretin family. They are encoded on the same
gene in vertebrates (birds, amphibian, fish) as well as in the invertebrate
tunicate[10, 11]. But in mammals, the two peptides are encoded on
separate genes. PACAP is the highly conserved member of this family.
Conservation during the evolution from protochordate to mammals has yield a 96%
amino acid sequence identity between mammalian and tunicate PACAP-27[10].
In contrast, GHRH is only moderately conserved.
The PACAP gene and/or cDNA have
been cloned from human[12-14], sheep[12], rat[15],
mouse[16], chicken[11], frog[17, 18], salmon[19,
20], catfish[21], goldfish[22], zebrafish[9]
and tunicate[10]. Recently, using an in vitro cell perifusion
system, PACAP was shown to induce growth hormone (GH) and gonadotropin (GtH)
release from goldfish and common carp pituitary cell in a dose-dependent
manner, suggesting that PACAP may be involved in seasonal regulation of body
growth and reproduction in fish[23, 24].
The groupers (Epinephelus) are
highly priced and popular marine cultured fish in China and Southeast Asia
countries. However, the grouper larvae growth is slow, high mortality may be
occurred in 14-20 days post hatch. In this paper, the coding region of a gene
encoding PACAP and GHRH precursor were synthesized by RT-PCR from total RNA of
the grouper (Epinephelus coioides) hypothalamic tissue, and we also
examined the presence of PACAP and GHRH mRNAs in embryos and changes in its
expression in early development and tissue distribution in the central nervous
system and several peripheral tissues by semi-quantitative RT-PCR. Our research
objective will be further expanded to examine the potential applications of
PACAP in marine aquaculture, in particular, we will focus on the possible use
of gene recombinant PACAP as a new growth-promoting supplement of fish feed and
a new additive of ovalutory agent for induced spawning in the groupers.
1 Materials and
Methods
1.1 Grouper total RNA
extraction and reverse transcriptase-polymerase chain reaction
Total RNA was extracted using Trizol
(Invitrogen/Life Technologies, Burlington, ON) based on the guanidium
thiocyanate-phenol-chloroform method of extraction. The concentration of the
total RNA was estimated by measuring the absorbance at 260 nm. First strand
cDNA was then reverse-transcribed from 5 μg of total RNA using SuperscriptTM
First-Strand Synthesis system (Gibco BRL) following the manufacturers’s
protocol. Two degenerate sense primers and one antisense primer for nested PCR
reaction were used to amplify the internal region of grouper PACAP/GHRH cDNA
(Table 1). The design of these primers was based on the most conserved amino
acid sequences in known teleost PACAP/GHRH. The 50 μl first PCR reaction
mixture consisted of 2 μl first strand cDNA (template), 1.5 μl of 10 μmol/L P1
and P3, 0.8 mmol/L dNTP mix, 1.25 u Taq DNA polymerase (Gibco BRL) in 5 μl of
10× Taq buffer, 0.8 mmol/L MgCl2. PCR was carried out for 3 min denaturation
(94 ℃), followed by 25 cycles of 45 s denaturation (94 ℃), 30 s primer
annealing (55 ℃), 1 min and 30 s primer extension (72 ℃), and a final extension
for 10 min. 1 μl first round PCR product was removed and amplified again under
the same conditions except using P2 instead of P1. PCR products of the expected
size were separated by electrophoresis using a 1.7% agarose gel. The
anticipated band was purified using E.Z.N.A.Gel Extraction Kit (Omega
D2501-02).
Table 1 Primers used in cloning grouper PACAP/GHRH cDNA(5′-3′)
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(1) |
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(2) Primers for cloning the 3′-end |
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(3) Primers for cloning the 5′-end |
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(4) mRNA expression primers |
3′-RACE reactions were performed
using AP, P4, P5 and UAP (Table 1), the PCR product was extracted, gel purified
as previously described. 5′RACE reactions were done over two rounds. P7 and
AUAP were primers in the first round PCR. In second round reactions, 2 μl of
the first round PCR product was regarded as template while P8 and AUAP as
primers. All PCR reactions ran for 25 cycles with a 10 min extension at 72 ℃ on
the last cycle. Annealing temperatures used for nested PCR was 55 ℃. Each
primer is indicated in Table 1. RACE PCR products were visualized by staining
the gels in ethidium bromide and viewed with the BioRAD Gel Doc 2000. Ligation
into pGEM-T easy vector (Promega, Madison, WI) was performed using the PCR
products isolated from the agarose gels using E.Z.N.A.Gel Extraction Kit
according to the manufacturer’s instructions. DNA was transformed and
processed. After enzyme digestion with Eco RI (TaKaRa, Japan), preparations
with inserts of expected size were sequenced.
Samples of 20 eggs and embryos at
each stage of embryogenesis were pooled and immediately frozen in liquid
nitrogen. Adult grouper, egg, embryo and larvae were obtained from Daya bay
aquaculture center.
1.2 Sequence analysis
DNA sequences were analyzed with
the BLASTn program available from the NCBI internet website. Protein
translations were done and analyzed with the same source and the programs BLASTx
or BLASTp. Multiple alignments of cDNA and amino acid sequences were performed
with the programs CLUSTAL and ALIGN. Phylogenetic analysis was conducted with
the Treeview program and Clustalx with 0.1.
1.3 Tissue distribution
The RT-PCR was validated by
running PCR reactions for different cycles and different concentration to
determine the cycle number and concentration for each gene that generates half
maximal PCR product. After an initial denaturation for 3 min at 94 °C, the
reaction was performed on the Thermal Controller PTC-200 (MJ Research,
Watertown, MA) with the cycling profile of 45 s at 94 °C, 30 s at 45-60 °C, and 90s at 72 °C followed
by a 10 min extension at 72 °C. Primers see Table 1. After the determination of
the cycle number, the PCR reactions were performed with the template
concentration from 50-350 ng. PCR reaction (5 μl) was electrophoresed on agarose gel
containing ethidium bromide to visualize the products and the yield of PCR
products was quantitated with the Gel Doc 2000 (BioRAD).The specificity of the
reactions was confirmed by cloning the PCR products into pGem-T-easy victor and
sequenced. The PCR for β-actin was performed to serve as an internal of control
in mRNA concentration in the RT reaction with the annealing temperature 60 ℃.
Distribution of the grouper
GHRH/PACAPprecursor mRNAs were examined by RT-PCR withprimers P9 and P10 in
embryos and early development. First-strand cDNA was prepared from total RNA by
treated with DNase. PCR conditions were 30 cycles of 94 °C for 90 s, 55 °C for
45 s, and 72 °C for 90 s, followed by a final extension at 72 °C for 10 min.
For an internal control, RT-PCR was performed at the same time with the primer
for grouper β-actin with annealing temperature 60 °C. PCR products were
separated on 1.4% agarose gels containing ethidium bromide and detected under
ultraviolet light with the Gel Doc 2000 (BioRAD) and analyzed with Quantity one
Tutorial-Quantity standards.
2 Results
2.1 Isolation of grouper
GHRH/PACAP precursor cDNA
A single cDNA fragment of 288 bp
was isolated from grouper hypothalamic tissue by nested PCR with P2 and P3. Two
fragments of 351 and 456 bp were isolated with P7 and P8, respectively (Fig.1).
The two products isolated with primers P7 and P8 differed only in their deletion
or retention of exon 4, respectively. One clone containing exon 4 and another
with exon 4 deleted were amplified by 5′ RACE PCR and sequenced. The grouper
precursor cDNA contained a signal peptide from 338-398 bp (1-20 aa), GHRH from 651-785 bp (85-128 aa), and PACAP from 792-843 bp (131-168 aa). Grouper PACAP is
preceded by a dibasic amino acid enzyme processing site (Lys-Arg) and is
followed by a Gly-Arg-Arg processing site which would yield a 38 amino acids
peptide with an amidated C terminus. Processing at a second amidation site
within the PACAP sequence would result in the 27 amino acids PACAP.
Organization of the grouper gene is very similar to that of the channel
catfish. Grouper GHRH is preceded by a threonine with a dibasic Lys-Arg site 3
amino acids upstream and followed by a Lys-Arg site at the C terminus (Fig.2).
